CDS

Accession Number TCMCG017C30470
gbkey CDS
Protein Id OMO62225.1
Location complement(join(5245..5367,5586..5690,5777..5914,5992..6129,6214..6321,6580..6690,7098..7164,7469..7651,7770..7850,7958..8043,8439..8528,8642..8722,8815..8913,9036..9101,9361..9469,9718..9815,10199..10309,10850..10909,11059..11262,11621..11719,11824..11931,12207..12251,12348..12410,12580..12657,12739..12807,12938..13076,13821..13903,13982..14089,14414..14485,14610..14702,14969..15085,16342..16440))
GeneID InterPro:IPR001494
Organism Corchorus olitorius
locus_tag COLO4_33169

Protein

Length 1076aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01021436.1
Definition hypothetical protein COLO4_33169 [Corchorus olitorius]
Locus_tag COLO4_33169

EGGNOG-MAPPER Annotation

COG_category UY
Description atcrm1,atxpo1,hit2,xpo1,xpo1a
KEGG_TC 1.I.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K14290        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03008        [VIEW IN KEGG]
ko03013        [VIEW IN KEGG]
ko04013        [VIEW IN KEGG]
ko05164        [VIEW IN KEGG]
ko05166        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map03008        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map04013        [VIEW IN KEGG]
map05164        [VIEW IN KEGG]
map05166        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000054        [VIEW IN EMBL-EBI]
GO:0000055        [VIEW IN EMBL-EBI]
GO:0000056        [VIEW IN EMBL-EBI]
GO:0000122        [VIEW IN EMBL-EBI]
GO:0000775        [VIEW IN EMBL-EBI]
GO:0000776        [VIEW IN EMBL-EBI]
GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005049        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009826        [VIEW IN EMBL-EBI]
GO:0009846        [VIEW IN EMBL-EBI]
GO:0009856        [VIEW IN EMBL-EBI]
GO:0009860        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009932        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019904        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0032386        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032879        [VIEW IN EMBL-EBI]
GO:0032880        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033157        [VIEW IN EMBL-EBI]
GO:0033750        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046822        [VIEW IN EMBL-EBI]
GO:0046825        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048868        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051049        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051223        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051640        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051656        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060341        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070201        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071428        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090087        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0140104        [VIEW IN EMBL-EBI]
GO:0140142        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1903827        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGGCTGAGAGGCTTAGGGATTTAAGTCAGCCGATTGATGTTGCCCTGCTTGACGCCACCGTCGCGGCCTTTTACGGCACCGGATCTAAAGAAGAGAGAGCACAAGCAGATCATATATTGCGAGATCTGCAAAATAATCCTGACATGTGGCTTCAAGTTGTGCATATCCTGCAGCAGACAAAGAGCCTTAATACCAAGTTCTTTGCCTTGCAGGTTCTTGAAGGTGTAATCAAGTATAGATGGAATGCTTTGCCTGTTGAGCAGCGTGATGGGATGAAAAACTACATTTCTGAAGTCATTGTGCAGTTGTCAAGCAACGAGGCCTCCTTTCGAGCAGAAAGGCTGTATGTCAACAAGCTGAATATTATATTGGTTCAGATCTTAAAGCATGATTGGCCTGCTAGATGGCGAAGCTTCATTCCTGATCTTGTTGCTGCTGCAAAAACCAGTGAAACAATTTGTGAAAACTGCATGGCAATACTGAAACTTCTAAGTGAAGAAGTTTTTGATTTCTCAAGAGGTGAAATGACTCAACAGAAGATCAAAGAACTTAAGCAATCACTAAACAGTGAGTTTCAACTCATTCATGAGTTGTGCTTATACGTACTATCAGCTTCTCAGAGAACAGAGCTTATACGGGCTACACTATCCACCTTGCATGCATTTCTTTCATGGATTCCTCTTGGCTATATTTTTGAATCAACATTGCTGGAAACACTCCTAAAATTTTTTCCCGTCCCTTCATATCGGAATCTCACCCTCCAATGTCTTACAGAGGTGGCTGCCTTAAATTTTGGGGACTACTATAACATGCAATATGTTAAGATGTACAATGTATTTATGGTCCAGTTGCAGACCATTCTCCCACCAACTACAAACATCCCTGAGGCTTATGGACATGGAAGCAGTGAGGAGCAGGCATTCATTCAGAACTTGGCATTGTTCTTCACTTCATTCTACAAGTTTCACATTCGGGTGCTGGAGACTGCACAAGAGAATATTTCTGCACTGTTAATTGGTCTGGAATACCTTATCAACATATCTTATGTAGATGATACAGAGGTCTTTAAGGTTTGCTTGGACTATTGGAACTCGTTGGTCTTAGAGCTATTTGATGCACACCATAACGTGGAAAATCCTGCAGTAACTGCAAACATGATGGGACTGCAGGTGCCTTTGATTTCTGGCATGGTTGATGGCCTTAATGCACAGCTTCATCAAAGGCGACAACTTTATGCTGGCACAATGTCGAAGCTTAGAATGCTCATGATTTGCCGTATGGCAAAGCCTGAGGAGGTTCTGATAGTTGAAGATGAAAATGGGAATATTGTTCGAGAGACGATGAAGGATAATGATGTTCTTGTTCAGTATAAGATTATGAGGGAGACATTGATCTATTTGTCTCACCTTGATCATGAGGATACTGAAAAGCAGATGCTAAAGAAATTAAGCAAGCAATTGAGTGGTGAAGATTGGACTTGGAACAACTTGAACACGTTATGCTGGGCAATAGGATCCATTTCTGGTTCAATGATGGAAGAACAGGAAAACAGGTTTCTTGTGATGGTCATTCGTGATTTGCTAAATTTGTGTGAAATCACAAAAGGGAAGGACAATAAAGCTGTTATTGCTAGTAATATCATGTATGTTGTTGGGCAGTATCCAAGGTTTTTAAGGGCTCACTGGAAGTTCTTGAAAACTGTTGTGAATAAATTGTTCGAGTTCATGCATGAAACGCATCCAGGAGTTCAGGATATGGCCTGCGATACCTTTTTGAAAATTGTCCAGAAGTGCAAGCGAAAATTTGTGATTGTGCAGGTTGGAGAGAACGAAGCATTTGTGTCTGAACTTCTATCTTCTCTTGCAACAACGGTTGCAGATCTGGAGCCTCATCAGATTCATACATTTTATGAATCTGTTGGTCATATGATTCAAGCAGAATCTGATCCCCATAAGAGGGATGAATACCTGCAGAGACTGATGGAACTACCCAACCAGAAATGGGGTGAAATTATAGGGCAGGCACGTCAAAGTGTTGACTTCCTTAAAGATCAGGATGTAATAAGAACTGTGCTAAACATATTGCAGACAAATACTAGTGTGGCCAGCTCTCTCGGAACATATTTCTTAACGCAAATTTCTTTAATCTTTCTGGACATGCTTAATGTATACAGAATGTACAGTGAGCTTATATCCAGTAGTATTGCTGAAGGAGGTCCCTTTGCATCAAAAACATCCTATGTCAAACTTCTTCGATCTGTTAAAAGGGAGACTCTCAAGCTCATTGAAACATTTTTGGACAAGGCTGAAGATCAACCACAAATTGGGAAACAATTTGTGCCCCCAATGATGGATCCAGTTCTTGGTGATTATGCTAGGAATTTGCCTGATGCTAGAGAATCTGAAGTTTTGTCACTTTTTGCTACAATAATTAACAAGTATAAAGCTGCAATGATAGATGATGTTCCTCGAATATTTGAAGCTGTTTTCCAGTGCACGCTGGAGATGATTACCAAAAATTTTGAAGATTACCCTGAACATCGCCTTAAATTCTTTTCATTGCTTCGTGCCATTGCTACTCATTGTTTTCCTGCGCTTATTCGGTTGTCAAGTCAGCAACTAAAGCTAGTTATGGATTCAATCATTTGGGCATTTCGGCATACAGAGAGGAATATTGCAGAAACTGGTCTAAATCTTTTACTGGAGATGCTGAAAAACTTTCAGGCTTCTGAATTTTGTAACCAGTTCTATCGAACATACTTTGTGACAATTGAGCAAGAAATATTTGCCGTCTTGACAGACACATTTCACAAACCTGGCTTCAAGTTGCATGTCTTGGTTTTGCAGCACCTCTTCTGCCTGGTTGAGAGCGGCTTATTGACTGAGCCCTTATGGGATGCTGCTACAGTTCCAATGCCTTATCCAAATAATGGAATGTTTGTTCGTGAATACACAATAAAACTTCTGAGTACATCATTCCCGAACATGACTACTACTGAGGTCACTCAATTTGTGAATGGACTATTTGAGTCCAGGAATGATTTGTCCACATTTAAGAATCACATACGGGACTTCCTTGTGCAATCGAAAGAATTTTCAGCTCAGGACAACAAAGATCTCTATGCTGAAGAGGCTGCTGTACAGAGGGAAAGAGAGCGACAACGGATGCTTTCTATACCAGGGCTCATTGCTCCAAATGAGATACAAGACGAGATGTTGGACTCATAG
Protein:  
MAAERLRDLSQPIDVALLDATVAAFYGTGSKEERAQADHILRDLQNNPDMWLQVVHILQQTKSLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSSNEASFRAERLYVNKLNIILVQILKHDWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQQKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLSTLHAFLSWIPLGYIFESTLLETLLKFFPVPSYRNLTLQCLTEVAALNFGDYYNMQYVKMYNVFMVQLQTILPPTTNIPEAYGHGSSEEQAFIQNLALFFTSFYKFHIRVLETAQENISALLIGLEYLINISYVDDTEVFKVCLDYWNSLVLELFDAHHNVENPAVTANMMGLQVPLISGMVDGLNAQLHQRRQLYAGTMSKLRMLMICRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQMLKKLSKQLSGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNKAVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRKFVIVQVGENEAFVSELLSSLATTVADLEPHQIHTFYESVGHMIQAESDPHKRDEYLQRLMELPNQKWGEIIGQARQSVDFLKDQDVIRTVLNILQTNTSVASSLGTYFLTQISLIFLDMLNVYRMYSELISSSIAEGGPFASKTSYVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVPPMMDPVLGDYARNLPDARESEVLSLFATIINKYKAAMIDDVPRIFEAVFQCTLEMITKNFEDYPEHRLKFFSLLRAIATHCFPALIRLSSQQLKLVMDSIIWAFRHTERNIAETGLNLLLEMLKNFQASEFCNQFYRTYFVTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESGLLTEPLWDAATVPMPYPNNGMFVREYTIKLLSTSFPNMTTTEVTQFVNGLFESRNDLSTFKNHIRDFLVQSKEFSAQDNKDLYAEEAAVQRERERQRMLSIPGLIAPNEIQDEMLDS